Package: rMSA
Title: Interface for Popular Multiple Sequence Alignment Tools
Description: Seamlessly interfaces the Multiple Sequence Alignment
        software packages ClustalW, MAFFT, MUSCLE and Kalign
        (downloaded separately) and provides support to calcualte
        distances between sequences. This work was partially supported
        by grant no. R21HG005912 from the National Human Genome
        Research Institute.
Version: 0.99.1
Date: 2024-05-22
Author: Michael Hahsler, Anurag Nagar
Maintainer: Michael Hahsler <mhahsler@lyle.smu.edu>
biocViews: Genetics, Sequencing, Infrastructure, Alignment
Depends: Biostrings (>= 2.26.2)
Imports: methods, pwalign, seqLogo, proxy, ape
SystemRequirements: ClustalW, Kalign, MAFFT, MUSCLE, boxshade
License: GPL-3
Config/pak/sysreqs: zlib1g-dev
Repository: https://mhahsler.r-universe.dev
Date/Publication: 2024-05-22 14:53:27 UTC
RemoteUrl: https://github.com/mhahsler/rMSA
RemoteRef: HEAD
RemoteSha: 4772797ab600332496167a20791f0a26c3b711e3
NeedsCompilation: no
Packaged: 2026-07-03 08:53:22 UTC; root